AOD15599.1 protein (Xanthomonas fragariae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Xanthomonas fragariae

NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOD14107.1	AOD15599.1	BER92_04430	BER92_13835	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
AOD14107.1	AOD16666.1	BER92_04430	BER92_14790	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.530
AOD14957.1	AOD15599.1	BER92_09620	BER92_13835	Zonular occludens toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AOD14957.1	oar	BER92_09620	BER92_12400	Zonular occludens toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
AOD15599.1	AOD14107.1	BER92_13835	BER92_04430	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
AOD15599.1	AOD14957.1	BER92_13835	BER92_09620	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zonular occludens toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AOD15599.1	AOD16666.1	BER92_13835	BER92_14790	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
AOD15599.1	BER92_06575	BER92_13835	BER92_06575	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M14; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.451
AOD15599.1	fusA	BER92_13835	BER92_05150	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]	0.455
AOD15599.1	oar	BER92_13835	BER92_12400	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
AOD15599.1	purA	BER92_13835	BER92_13840	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.	0.418
AOD16666.1	AOD14107.1	BER92_14790	BER92_04430	Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.530
AOD16666.1	AOD15599.1	BER92_14790	BER92_13835	Peptidase M61; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.404
BER92_06575	AOD15599.1	BER92_06575	BER92_13835	Peptidase M14; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.451
BER92_06575	oar	BER92_06575	BER92_12400	Peptidase M14; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
fusA	AOD15599.1	BER92_05150	BER92_13835	Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.455
fusA	purA	BER92_05150	BER92_13840	Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]	Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.	0.811
oar	AOD14957.1	BER92_12400	BER92_09620	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zonular occludens toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.726
oar	AOD15599.1	BER92_12400	BER92_13835	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.481
oar	BER92_06575	BER92_12400	BER92_06575	Oar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M14; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403