AOD16695.1 protein (Xanthomonas fragariae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Xanthomonas fragariae

NCBI taxonomy Id: 48664
Other names: ATCC 33239, CCUG 23372, CFBP 2157, DSM 3587, ICMP 5715, LMG 708, LMG:708, VKM B-2165, X. fragariae

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOD13965.1	AOD13992.1	BER92_03525	BER92_03700	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
AOD13965.1	AOD14062.1	BER92_03525	BER92_04155	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
AOD13965.1	AOD14550.1	BER92_03525	BER92_07135	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AOD13965.1	AOD15564.1	BER92_03525	BER92_13620	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AOD13965.1	AOD16472.1	BER92_03525	BER92_02675	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.664
AOD13965.1	AOD16695.1	BER92_03525	BER92_16290	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.727
AOD13965.1	pilI	BER92_03525	BER92_04175	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.468
AOD13992.1	AOD13965.1	BER92_03700	BER92_03525	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	0.581
AOD13992.1	AOD14062.1	BER92_03700	BER92_04155	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
AOD13992.1	AOD14550.1	BER92_03700	BER92_07135	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.634
AOD13992.1	AOD15560.1	BER92_03700	BER92_13600	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AOD13992.1	AOD15564.1	BER92_03700	BER92_13620	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
AOD13992.1	AOD16695.1	BER92_03700	BER92_16290	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.564
AOD13992.1	pilI	BER92_03700	BER92_04175	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.510
AOD14062.1	AOD13965.1	BER92_04155	BER92_03525	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division ZapA family protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.	0.763
AOD14062.1	AOD13992.1	BER92_04155	BER92_03700	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	LppC family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.411
AOD14062.1	AOD14550.1	BER92_04155	BER92_07135	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
AOD14062.1	AOD15560.1	BER92_04155	BER92_13600	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.531
AOD14062.1	AOD15564.1	BER92_04155	BER92_13620	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
AOD14062.1	AOD16472.1	BER92_04155	BER92_02675	Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712