STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW85426.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
ORW85425.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
ORW82413.1
Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.541
ORW85453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.473
ORW85424.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.436
Your Current Organism:
Mycobacterium riyadhense
NCBI taxonomy Id: 486698
Other names: CIP 109808, DSM 45176, M. riyadhense, Mycobacterium riyadhense van Ingen et al. 2009, strain NLA000201958
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.