STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN42_g3526NmrA domain-containing protein. (308 aa)    
Predicted Functional Partners:
ACN42_g4721
Uncharacterized protein.
    
 0.764
ACN42_g2587
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.739
ACN42_g1356
Uncharacterized protein.
    
  0.739
ACN42_g5394
DRIM domain-containing protein.
   
  0.642
ACN42_g5117
Uncharacterized protein.
    
  0.610
ACN42_g6742
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.594
ACN42_g5796
Uncharacterized protein.
    
  0.594
ACN42_g2054
WD_REPEATS_REGION domain-containing protein.
    
  0.594
ACN42_g1058
PINc domain-containing protein.
    
  0.594
ACN42_g1656
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.594
Your Current Organism:
Penicillium freii
NCBI taxonomy Id: 48697
Other names: CBS 476.84, IMI 285515, P. freii
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