Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cog8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (587 aa)    
Predicted Functional Partners:
cog4
Component of oligomeric golgi complex 4.
   
 0.999
cog3
Component of oligomeric golgi complex 3.
   
 0.999
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.999
cog1
Component of oligomeric golgi complex 1.
   
 0.999
LOC103151420
Component of oligomeric golgi complex 7.
   
 0.999
cog2
Component of oligomeric golgi complex 2.
   
 0.999
ENSPFOP00000026760
Component of oligomeric golgi complex 5.
   
 0.999
LOC103144292
Syntaxin 16.
    
 0.993
smim7
Small integral membrane protein 7.
   
 0.974
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.974
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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