Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dus2Dihydrouridine synthase 2. (541 aa)    
Predicted Functional Partners:
ENSPFOP00000018153
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.991
ENSPFOP00000012674
THUMP domain containing 1.
  
 
 0.908
SCYL2
SCY1 like pseudokinase 2.
      
 0.888
trmt1l
tRNA methyltransferase 1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.864
trmt1
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.864
dimt1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.839
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
  
  
 0.838
ENSPFOP00000004882
DTW domain containing 1.
      
 0.831
dtwd2
DTW domain containing 2.
      
 0.815
LOC103148946
MAP6 domain containing 1.
      
 0.811
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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