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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDIT4LDNA damage inducible transcript 4 like. (193 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
     
 0.822
tbc1d7
TBC1 domain family, member 7.
     
 0.659
LOC103131447
Uncharacterized protein.
   
 
 0.576
ENSPFOP00000003608
TSC complex subunit 1b.
   
 
 0.576
ENSPFOP00000024185
Uncharacterized protein.
   
 
 0.576
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.549
LOC103155532
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 
 0.532
LOC103155534
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 
 0.532
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 
 0.532
ENSPFOP00000000479
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
   
  0.523
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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