ENSPFOP00000000039 protein (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000000039	ENSPFOP00000004290	ENSPFOP00000000039	ENSPFOP00000004290	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	PIH1 domain containing 1.	0.981
ENSPFOP00000000039	ENSPFOP00000005685	ENSPFOP00000000039	ENSPFOP00000005685	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RNA polymerase II associated protein 1.	0.992
ENSPFOP00000000039	ENSPFOP00000009870	ENSPFOP00000000039	ENSPFOP00000009870	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.992
ENSPFOP00000000039	ENSPFOP00000017386	ENSPFOP00000000039	ENSPFOP00000017386	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RNA polymerase II associated protein 2.	0.994
ENSPFOP00000000039	ENSPFOP00000030966	ENSPFOP00000000039	ENSPFOP00000030966	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.979
ENSPFOP00000000039	gpn3	ENSPFOP00000000039	ENSPFOP00000019786	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.985
ENSPFOP00000000039	polr2b	ENSPFOP00000000039	ENSPFOP00000017158	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.985
ENSPFOP00000000039	polr2c	ENSPFOP00000000039	ENSPFOP00000028933	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.977
ENSPFOP00000000039	polr2m	ENSPFOP00000000039	ENSPFOP00000030774	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	RNA polymerase II subunit M.	0.976
ENSPFOP00000000039	polr3b	ENSPFOP00000000039	ENSPFOP00000016576	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.976
ENSPFOP00000004290	ENSPFOP00000000039	ENSPFOP00000004290	ENSPFOP00000000039	PIH1 domain containing 1.	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	0.981
ENSPFOP00000004290	ENSPFOP00000017386	ENSPFOP00000004290	ENSPFOP00000017386	PIH1 domain containing 1.	RNA polymerase II associated protein 2.	0.985
ENSPFOP00000004290	ENSPFOP00000030966	ENSPFOP00000004290	ENSPFOP00000030966	PIH1 domain containing 1.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.974
ENSPFOP00000004290	gpn3	ENSPFOP00000004290	ENSPFOP00000019786	PIH1 domain containing 1.	GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.982
ENSPFOP00000004290	polr2b	ENSPFOP00000004290	ENSPFOP00000017158	PIH1 domain containing 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
ENSPFOP00000004290	polr2c	ENSPFOP00000004290	ENSPFOP00000028933	PIH1 domain containing 1.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.974
ENSPFOP00000004290	polr2m	ENSPFOP00000004290	ENSPFOP00000030774	PIH1 domain containing 1.	RNA polymerase II subunit M.	0.965
ENSPFOP00000004290	polr3b	ENSPFOP00000004290	ENSPFOP00000016576	PIH1 domain containing 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
ENSPFOP00000005685	ENSPFOP00000000039	ENSPFOP00000005685	ENSPFOP00000000039	RNA polymerase II associated protein 1.	GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.	0.992
ENSPFOP00000005685	ENSPFOP00000009870	ENSPFOP00000005685	ENSPFOP00000009870	RNA polymerase II associated protein 1.	GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.	0.995