Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103129411Stathmin; Belongs to the stathmin family. (162 aa)    
Predicted Functional Partners:
nek1
NIMA-related kinase 1.
    
 
 0.697
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.606
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.585
ENSPFOP00000015912
WD repeat domain 90.
    
 0.546
ENSPFOP00000000086
Protein kinase domain-containing protein.
    
 
 0.542
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.525
ENSPFOP00000018348
Chaperonin containing TCP1, subunit 8 (theta).
    
 0.524
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
  0.522
cct4
T-complex protein 1 subunit delta.
   
 
 0.517
hunk
Hormonally up-regulated Neu-associated kinase.
    
 
 0.513
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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