Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103129416Zinc finger protein 395a. (373 aa)    
Predicted Functional Partners:
ENSPFOP00000005078
BRCA1 associated RING domain 1.
    
 0.707
LOC103149291
RAB33A, member RAS oncogene family.
    
 
 0.620
ENSPFOP00000017299
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.606
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.603
babam1
BRISC and BRCA1 A complex member 1.
    
 0.594
ENSPFOP00000003275
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.564
ENSPFOP00000000479
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
    
   0.561
LOC103145207
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.561
LOC103145510
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.561
rag2
Recombination activating gene 2.
   
 0.554
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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