Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPP3CASerine/threonine-protein phosphatase. (525 aa)    
Predicted Functional Partners:
ENSPFOP00000029221
RHD domain-containing protein.
    
 0.989
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.975
ENSPFOP00000000867
Nuclear factor of activated T cells 2a.
    
 0.966
LOC103132293
Nuclear factor of activated T cells 3a.
    
 0.965
LOC103134566
RHD domain-containing protein.
    
 0.955
ENSPFOP00000014641
Calmodulin-like 4a.
    
 0.943
tfeb
Transcription factor EB.
   
 0.916
ENSPFOP00000000547
Uncharacterized protein.
   
 0.911
ppp3r1
Uncharacterized protein.
   
 0.911
LOC103150912
Calcineurin-like EF-hand protein 2.
    
 0.848
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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