Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chl1Cell adhesion molecule L1-like b. (1168 aa)    
Predicted Functional Partners:
ENSPFOP00000005575
Contactin 2.
   
 0.779
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.722
ENSPFOP00000000103
Uncharacterized protein.
   
 0.678
ENSPFOP00000000245
Contactin 4.
   
 0.678
cntn5
Contactin 5.
   
 0.678
CNTN1
Contactin 1.
   
 0.678
ENSPFOP00000005936
Contactin 3a, tandem duplicate 2.
   
 0.678
LOC103138930
Contactin 3a, tandem duplicate 1.
   
 0.678
LOC103156705
Contactin 1b.
   
 0.678
ENSPFOP00000015429
Contactin 1b.
   
 0.678
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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