Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103139032Tumor necrosis factor receptor superfamily, member 9a. (296 aa)    
Predicted Functional Partners:
LOC103154502
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.784
ENSPFOP00000003085
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.784
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.784
tbccd1
TBCC domain containing 1.
      
 0.679
LOC103139595
Ig-like domain-containing protein.
      
 0.667
ENSPFOP00000007079
Blood vessel epicardial substance.
      
 0.635
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 
 0.630
crtam
Uncharacterized protein.
   
  
 0.615
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.613
LOC103136741
Uncharacterized protein.
   
  
 0.590
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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