Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103129518Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
ENSPFOP00000024691
PID domain-containing protein.
 
      0.888
LOC103130959
Uncharacterized protein.
    
 
 0.673
ENSPFOP00000019429
PX domain containing 1b.
    
   0.599
ENSPFOP00000000488
Uncharacterized protein.
    
 0.588
rab1a
Uncharacterized protein.
    
 0.588
ENSPFOP00000012635
ZRAB1B, member RAS oncogene family a.
    
 0.588
ENSPFOP00000013841
Zgc:171927.
    
 0.588
LOC103151367
RAB6B, member RAS oncogene family a.
    
 0.549
RAB6B
RAB6B, member RAS oncogene family.
    
 0.549
RAB41
RAB41, member RAS oncogene family.
    
 0.549
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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