STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000000372Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (275 aa)    
Predicted Functional Partners:
ENSPFOP00000015084
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.985
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.963
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
   
  
 0.783
LOC103156966
Cytochrome c-1.
   
 
 0.772
mrpl35
Mitochondrial ribosomal protein L35.
   
  
 0.657
ENSPFOP00000005730
LisH domain-containing protein.
    
 
 0.656
ndufa9
NADH:ubiquinone oxidoreductase subunit A9a.
   
 
 0.631
LOC103138136
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
   
  
 0.591
agk
Acylglycerol kinase.
    
 
 0.567
rexo4
REX4 homolog, 3'-5' exonuclease.
      
 0.564
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.