STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000000986Charged multivesicular body protein 3. (223 aa)    
Predicted Functional Partners:
ENSPFOP00000018326
Charged multivesicular body protein 2A.
   
0.999
ist1
IST1 factor associated with ESCRT-III.
    
 0.986
chmp1b
Chromatin modifying protein 1B.
 
 
 0.970
ENSPFOP00000006627
Charged multivesicular body protein 4Bb.
   
 0.969
ENSPFOP00000016613
Charged multivesicular body protein 4C.
   
 0.969
LOC103156962
Uncharacterized protein.
   
 0.969
chmp1a
Charged multivesicular body protein 1A.
 
 
 0.969
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.964
ENSPFOP00000030355
Uncharacterized protein.
   
 0.964
chmp2b
Charged multivesicular body protein 2Bb.
   
0.955
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.