Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mmgt1Membrane magnesium transporter 1. (166 aa)    
Predicted Functional Partners:
emc6
ER membrane protein complex subunit 6.
   
 0.997
emc10
ER membrane protein complex subunit 10.
    
 0.996
emc1
ER membrane protein complex subunit 1.
    
 0.996
emc7
ER membrane protein complex subunit 7.
   
 0.996
emc8
ER membrane protein complex subunit 8.
    
 0.995
ENSPFOP00000019363
ER membrane protein complex subunit 2.
    
 0.994
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.993
LOC103150709
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 0.986
LOC103153490
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 0.985
emc9
ER membrane protein complex subunit 9.
    
 0.944
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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