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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mmgt1Membrane magnesium transporter 1. (166 aa)    
Predicted Functional Partners:
emc6
ER membrane protein complex subunit 6.
   
 0.985
ENSPFOP00000019363
ER membrane protein complex subunit 2.
    
 0.982
emc1
ER membrane protein complex subunit 1.
    
 0.981
emc8
ER membrane protein complex subunit 8.
    
 0.978
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.974
emc7
ER membrane protein complex subunit 7.
   
 
 0.968
emc10
ER membrane protein complex subunit 10.
    
 
 0.966
LOC103150709
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.935
LOC103153490
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.935
emc9
ER membrane protein complex subunit 9.
    
 0.905
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.