Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001007Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
ENSPFOP00000018333
Uncharacterized protein.
  
   
 0.698
ENSPFOP00000010376
Uncharacterized protein.
      
 0.565
gcg
Glucagon b.
     
 0.524
ENSPFOP00000008453
Dipeptidyl-peptidase 4; Belongs to the peptidase S9B family.
     
 0.453
LOC103145952
Si:dkey-185m8.2.
  
     0.445
LOC103148115
Ig-like domain-containing protein.
  
     0.437
ENSPFOP00000013202
Ubiquitin-like domain-containing protein.
  
     0.405
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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