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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103132163C-type lectin domain-containing protein. (249 aa)    
Predicted Functional Partners:
ENSPFOP00000015251
C-type lectin domain-containing protein.
  
 
 
0.894
clec4c
C-type lectin domain-containing protein.
   
 
 
0.888
LOC103136708
Si:dkey-26c10.5.
    
0.751
LOC103153507
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.588
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
  0.588
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
  0.588
LOC103136173
C-type lectin domain-containing protein.
  
 
 
0.509
ENSPFOP00000002726
COesterase domain-containing protein.
   
  0.502
ENSPFOP00000004307
C-type lectin domain-containing protein.
  
 
 
0.501
ENSPFOP00000009937
Uncharacterized protein.
    
 0.501
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.