Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amdhd1Amidohydrolase domain containing 1. (432 aa)    
Predicted Functional Partners:
ftcd
Formimidoyltransferase cyclodeaminase.
 
 
 0.992
uroc1
Urocanate hydratase 1.
  
 
 0.988
hal
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
 
 
 0.964
uprt
Uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae).
  
 
 0.844
aox1
Aldehyde oxidase 6.
  
 
 0.815
xdh
Xanthine dehydrogenase.
  
 
 0.815
nt5e
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
    
 0.773
ENSPFOP00000012803
Si:dkey-156n14.3.
   
 
 0.769
ENSPFOP00000002501
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.753
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
     
 0.744
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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