Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001029Receptor expression-enhancing protein. (330 aa)    
Predicted Functional Partners:
LOC103135555
Receptor expression-enhancing protein.
    
 
 0.971
reep3
Receptor expression-enhancing protein.
    
 
 0.883
ENSPFOP00000019606
Spastin; Belongs to the AAA ATPase family.
   
 
 0.863
zfyve27
Zinc finger, FYVE domain containing 27.
    
 
 0.778
ENSPFOP00000004447
Atlastin GTPase 2.
    
 
 0.772
sgf29
SAGA complex associated factor 29.
    
 
 0.771
LOC103140108
Atlastin 3.
    
 
 0.761
ENSPFOP00000016807
Atlastin GTPase 1.
    
 
 0.759
ENSPFOP00000026087
Atlastin GTPase 1.
    
 
 0.759
ENSPFOP00000025092
Reticulon.
   
 
 0.756
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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