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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan13Tetraspanin 13a; Belongs to the tetraspanin (TM4SF) family. (204 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
    
 0.555
LOC103150629
MET proto-oncogene, receptor tyrosine kinase.
    
 0.555
LOC103137246
Macrophage stimulating 1 receptor a.
    
 0.555
met
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.555
ankmy2
Ankyrin repeat and MYND domain containing 2a.
      
 0.547
ENSPFOP00000029593
Sorting nexin 13.
    
 
 0.522
slc30a5
Solute carrier family 30 member 5.
      
 0.506
ENSPFOP00000005958
Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.
    
  0.488
ENSPFOP00000029851
Uncharacterized protein.
    
  0.488
tmem41b
Transmembrane protein 41B.
      
 0.471
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.