Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001038Uncharacterized protein. (513 aa)    
Predicted Functional Partners:
LOC103154612
Ig_4 domain-containing protein.
   
 0.902
cd3e
Ig_4 domain-containing protein.
   
 0.902
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.613
palb2
PALB2_WD40 domain-containing protein.
  
 0.613
LOC103139595
Ig-like domain-containing protein.
   
 0.602
ENSPFOP00000000523
Spleen tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
  
 0.575
ENSPFOP00000015505
Tyrosine-protein kinase.
  
 0.575
ENSPFOP00000023628
Spleen tyrosine kinase.
  
 0.575
fdx1
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.571
fdx2
Ferredoxin 2.
  
 0.571
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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