Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103153604Kelch repeat-containing protein. (547 aa)    
Predicted Functional Partners:
ENSPFOP00000007561
Pumilio RNA-binding family member 1.
   
   0.829
pum2
Pumilio RNA-binding family member 2.
   
   0.829
ENSPFOP00000009522
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.799
LOC103139825
Sterol carrier protein 2b.
   
 0.799
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.754
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.741
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.731
hadhb
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.722
LOC103132215
Ubiquitin-like domain-containing protein.
   
 0.718
rps27a
Ribosomal protein S27a.
   
 0.718
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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