Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
LOC103139046Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family. (561 aa)    
Predicted Functional Partners:
ENSPFOP00000006783
Zinc finger, MYND-type containing 8.
   
 
 0.897
ENSPFOP00000011404
Protein kinase C binding protein 1, like.
   
 
 0.897
wdr13
WD repeat domain 13.
    
 
 0.872
LOC103145048
Rhodopsin.
      
 0.853
LOC103154220
Forkhead box P3b.
      
 0.852
LOC103154421
Histone H2A; Belongs to the histone H2A family.
   
 
 0.831
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.831
znf532
Zinc finger protein 532.
    
 
 0.802
ENSPFOP00000010411
Zinc finger protein 687b.
    
 
 0.802
ENSPFOP00000030715
Zinc finger protein 687a.
    
 
 0.802
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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