STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem71Si:ch211-235o23.1. (325 aa)    
Predicted Functional Partners:
ENSPFOP00000008817
Uncharacterized protein.
      
 0.542
RIMS2
Regulating synaptic membrane exocytosis 2.
      
 0.542
klhdc8a
Kelch domain containing 8A.
      
 0.482
ENSPFOP00000024041
IG domain-containing protein.
  
     0.449
ENSPFOP00000023080
Ig-like domain-containing protein.
  
     0.445
ENSPFOP00000016517
IG domain-containing protein.
  
     0.441
LOC103140589
Ig-like domain-containing protein.
  
     0.438
LOC103147783
AXH domain-containing protein.
  
     0.429
ccdc18
Coiled-coil domain containing 18.
      
 0.422
ENSPFOP00000006570
IG domain-containing protein.
  
     0.421
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.