Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
homer3Homer scaffold protein 3b. (360 aa)    
Predicted Functional Partners:
ENSPFOP00000015195
Glutamate receptor, metabotropic 1b.
    
 0.979
LOC103134970
Glutamate receptor, metabotropic 1a.
    
 0.979
LOC103142956
Homer scaffold protein 1b.
    
 0.958
LOC103152019
DSN1 component of MIS12 kinetochore complex.
    
  0.888
ENSPFOP00000017896
SH3 domain-containing protein.
    
   0.840
ENSPFOP00000007202
Glutamate receptor, metabotropic 5b.
    
 0.809
LOC103140495
Glutamate receptor, metabotropic 5a.
    
 0.809
MOS
MOS proto-oncogene, serine/threonine kinase; Belongs to the protein kinase superfamily.
    
  0.800
ENSPFOP00000021216
V-mos Moloney murine sarcoma viral oncogene homolog; Belongs to the protein kinase superfamily.
    
  0.800
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
   0.779
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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