Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001063Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
taf3
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.
    
 0.989
gtf2b
General transcription factor IIB.
  
 0.985
ENSPFOP00000002806
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.984
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.980
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.980
ENSPFOP00000003440
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.979
taf2
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.979
LOC103145653
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.977
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.977
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.976
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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