Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001075Myosin XVB. (1736 aa)    
Predicted Functional Partners:
ENSPFOP00000006498
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 
0.900
LOC103135897
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.734
ush1c
Usher syndrome 1C.
   
 0.719
ENSPFOP00000018091
Uncharacterized protein.
      
 0.711
ENSPFOP00000006636
Whirlin a.
    
 0.633
ENSPFOP00000009122
Whirlin b.
    
 0.633
ENSPFOP00000003588
DCC netrin 1 receptor.
    
  0.583
DCC
DCC netrin 1 receptor.
    
  0.583
ENSPFOP00000015954
Neogenin 1b.
    
  0.583
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.558
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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