Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001080Si:dkey-21a6.5. (314 aa)    
Predicted Functional Partners:
ENSPFOP00000015016
Si:dkeyp-110a12.4.
  
 
  0.563
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.492
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.474
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.474
ENSPFOP00000015763
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.457
ENSPFOP00000028219
Uncharacterized protein.
    
  0.455
ranbp2
RAN binding protein 2.
    
 0.453
LOC103129202
Si:ch211-252f13.5.
  
     0.444
ENSPFOP00000015912
WD repeat domain 90.
    
 0.442
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.441
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.