Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001088DEAH (Asp-Glu-Ala-His) box helicase 15. (727 aa)    
Predicted Functional Partners:
sf3b3
Splicing factor 3b, subunit 3.
   
 0.985
tfip11
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
   
 0.978
ENSPFOP00000004136
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.973
ENSPFOP00000009459
Small nuclear ribonucleoprotein polypeptide A.
   
 0.973
ENSPFOP00000016857
Splicing factor 3a, subunit 1.
   
 0.973
sf3b1
Splicing factor 3b, subunit 1.
   
 0.972
bysl
Bystin-like.
   
 
 0.972
rbm17
RNA binding motif protein 17.
   
 0.969
utp3
UTP3 small subunit processome component.
   
 0.969
ENSPFOP00000015249
BMS1 ribosome biogenesis factor.
   
 0.969
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.