Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tiprlTIP41, TOR signaling pathway regulator-like (S. cerevisiae). (264 aa)    
Predicted Functional Partners:
ppp4c
Serine/threonine-protein phosphatase.
   
 
 0.985
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 
 0.980
PPP6C
Serine/threonine-protein phosphatase.
  
 
 0.970
LOC103131314
Serine/threonine-protein phosphatase.
  
 
 0.970
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
    
 
 0.932
LOC103144021
Uncharacterized protein.
    
 
 0.932
ppp2ca
Serine/threonine-protein phosphatase.
   
 
 0.852
PPP2CA
Serine/threonine-protein phosphatase.
   
 
 0.852
LOC103131405
Serine/threonine-protein phosphatase.
   
 
 0.852
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.791
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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