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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001111Uncharacterized protein. (724 aa)    
Predicted Functional Partners:
LOC103140299
Amyloid beta (A4) precursor protein b.
    
 0.819
APP
Amyloid beta precursor protein.
    
 0.819
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.794
LOC103143100
Amyloid beta (A4) precursor-like protein 1.
    
 0.786
ENSPFOP00000003275
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.682
rad50
RAD50 homolog, double strand break repair protein.
   
 0.643
nbn
Nibrin.
    
  0.637
ENSPFOP00000010777
UF2 component of NDC80 kinetochore complex.
   
 0.615
LOC103134016
Mitogen-activated protein kinase.
    
 0.609
mapk10
Mitogen-activated protein kinase.
    
 0.609
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.