Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
smim13Small integral membrane protein 13. (86 aa)    
Predicted Functional Partners:
hypk
Huntingtin interacting protein K.
   
 
 0.907
ENSPFOP00000005064
N(alpha)-acetyltransferase 15, NatA auxiliary subunit a.
   
 
 0.872
NAA15
N(alpha)-acetyltransferase 15, NatA auxiliary subunit.
   
 
 0.872
naa60
N-acetyltransferase 15 (GCN5-related, putative).
   
 
 0.845
naa50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
   
 
 0.845
kat14
Lysine acetyltransferase 14.
   
 
 0.845
rpl35
Ribosomal protein L35.
   
 
 0.827
LOC103144500
Ribosomal protein L26.
   
   0.815
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.813
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.809
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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