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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001119Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
ENSPFOP00000008817
Uncharacterized protein.
    
 0.978
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.978
LOC103145251
Regulating synaptic membrane exocytosis 3.
    
 0.626
ENSPFOP00000013506
Uncharacterized protein.
    
 0.626
ENSPFOP00000019165
Regulating synaptic membrane exocytosis 1a.
    
 0.626
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 
  0.622
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 
  0.622
ENSPFOP00000008281
Regulating synaptic membrane exocytosis 4.
    
 0.602
ENSPFOP00000008260
SH3 domain-containing protein.
   
 0.580
ENSPFOP00000018502
Uncharacterized protein.
   
 0.580
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.