Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc90bCoiled-coil domain containing 90B. (238 aa)    
Predicted Functional Partners:
ENSPFOP00000007302
Family with sequence similarity 32 member A.
   
  
 0.892
ENSPFOP00000000026
NIN1 (RPN12) binding protein 1 homolog.
    
 
 0.784
trmt1l
tRNA methyltransferase 1-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.734
rab30
RAB30, member RAS oncogene family.
      
 0.693
alg6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.693
tmx1
Thioredoxin-related transmembrane protein 1.
      
 0.693
pcf11
PCF11 cleavage and polyadenylation factor subunit.
      
 0.681
wdr74
WD repeat domain 74.
      
 0.681
LOC103141910
Tetraspanin.
      
 0.635
ENSPFOP00000015449
Glutathione S-transferase rho; Belongs to the GST superfamily.
    
   0.609
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.