Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103139876Hairy-related 5. (196 aa)    
Predicted Functional Partners:
sgpl1
Sphingosine-1-phosphate lyase 1.
      
 0.688
LOC103155958
Hairy-related 13.
      
 0.658
fgf8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.505
ENSPFOP00000020110
Neurogenin 1.
    
 0.472
LOC103140455
Homeobox protein engrailed-like.
      
 0.455
LOC103130357
Hes family bHLH transcription factor 6.
      
 0.416
LOC103130357-2
Transcription cofactor HES-6-like.
      
 0.416
ENSPFOP00000014024
Ankyrin repeat and SOCS box containing 11.
      
 0.416
ENSPFOP00000012300
PR domain containing 11.
      
 0.415
hes1
Hairy-related 6.
      
 0.410
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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