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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103139876Hairy-related 5. (196 aa)    
Predicted Functional Partners:
fancg
FA complementation group G.
    
  0.648
fancl
FA complementation group L.
    
  0.648
fancc
FA complementation group C.
    
  0.648
fancf
FA complementation group F.
    
  0.648
fance
FA complementation group E.
    
  0.613
ENSPFOP00000013716
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.613
LOC103141192
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.613
nutf2
Nuclear transport factor 2.
    
  0.600
FANCA
FA complementation group A.
    
  0.600
ENSPFOP00000013153
Mitochondrial ribosomal protein L1.
    
  0.600
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.