Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001126Ephrin-B3a; Belongs to the ephrin family. (180 aa)    
Predicted Functional Partners:
ENSPFOP00000004002
Eph receptor B2a.
   
 0.900
nck1
Cytoplasmic protein.
    
 0.856
nck2
Cytoplasmic protein.
    
 0.856
EFNA2
Ephrin A2; Belongs to the ephrin family.
     
 0.850
ENSPFOP00000005996
Eph receptor B3a.
   
 0.824
ENSPFOP00000007695
Eph receptor B4b.
   
 0.824
ephb4
Eph receptor B4a.
   
 0.824
ephb3
Uncharacterized protein.
   
 0.824
LOC103137188
Uncharacterized protein.
   
 0.807
EPHB1
EPH receptor B1.
   
 0.807
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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