Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103151253Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
ENSPFOP00000013284
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.686
ENSPFOP00000001155
WD_REPEATS_REGION domain-containing protein.
    
 
 0.551
dld
Dihydrolipoyl dehydrogenase.
   
    0.539
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
   0.526
ect2
Epithelial cell transforming 2.
   
 
 0.473
memo1
Mediator of cell motility 1.
     
 0.473
LOC103154003
Uncharacterized protein.
   
 0.465
LOC103149604
Uncharacterized protein.
   
 0.465
LOC103129750
Ras homolog family member Gb.
   
 0.465
ENSPFOP00000002988
Uncharacterized protein.
   
 0.465
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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