Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001142Carboxypeptidase O. (333 aa)    
Predicted Functional Partners:
cpn1
Carboxypeptidase N, polypeptide 1.
   
 
 0.663
agt
Angiotensinogen; Belongs to the serpin family.
   
 
 0.650
cpe
Carboxypeptidase E.
     
 0.627
c5
Uncharacterized protein.
   
 0.618
LOC103144577
Phospholipase A(2).
   
  
 0.578
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
   
 
 0.573
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
 
 0.548
LOC103156827
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
      
 0.546
LOC103149216
Carnitine palmitoyltransferase 1Cb; Belongs to the carnitine/choline acetyltransferase family.
      
 0.546
LOC103155279
Perilipin 6.
      
 0.500
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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