kank1 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

kank1

KN motif and ankyrin repeat domains 1. (1292 aa)

Predicted Functional Partners:

KIF21A

0.783

ENSPFOP00000011219

0.783

kif4a

0.697

vat1l

0.684

LOC103134861

0.581

prkch

0.562

tpr

0.548

LOC103137288

0.548

ENSPFOP00000019318

0.543

ENSPFOP00000013018

0.531

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000011219	KIF21A	ENSPFOP00000011219	ENSPFOP00000007431	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.901
ENSPFOP00000011219	kank1	ENSPFOP00000011219	ENSPFOP00000001150	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	KN motif and ankyrin repeat domains 1.	0.783
ENSPFOP00000011219	kif4a	ENSPFOP00000011219	ENSPFOP00000019172	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.595
ENSPFOP00000013018	kank1	ENSPFOP00000013018	ENSPFOP00000001150	EMI domain-containing protein.	KN motif and ankyrin repeat domains 1.	0.531
ENSPFOP00000013018	vat1l	ENSPFOP00000013018	ENSPFOP00000012952	EMI domain-containing protein.	Vesicle amine transport 1-like.	0.734
ENSPFOP00000019318	kank1	ENSPFOP00000019318	ENSPFOP00000001150	Uncharacterized protein.	KN motif and ankyrin repeat domains 1.	0.543
KIF21A	ENSPFOP00000011219	ENSPFOP00000007431	ENSPFOP00000011219	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.901
KIF21A	kank1	ENSPFOP00000007431	ENSPFOP00000001150	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	KN motif and ankyrin repeat domains 1.	0.783
KIF21A	kif4a	ENSPFOP00000007431	ENSPFOP00000019172	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin family member 4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.595
LOC103134861	LOC103137288	ENSPFOP00000001288	ENSPFOP00000014127	Doublesex and mab-3 related transcription factor 1.	Translocated promoter region b, nuclear basket protein.	0.415
LOC103134861	kank1	ENSPFOP00000001288	ENSPFOP00000001150	Doublesex and mab-3 related transcription factor 1.	KN motif and ankyrin repeat domains 1.	0.581
LOC103134861	tpr	ENSPFOP00000001288	ENSPFOP00000006667	Doublesex and mab-3 related transcription factor 1.	Translocated promoter region a, nuclear basket protein.	0.415
LOC103137288	LOC103134861	ENSPFOP00000014127	ENSPFOP00000001288	Translocated promoter region b, nuclear basket protein.	Doublesex and mab-3 related transcription factor 1.	0.415
LOC103137288	kank1	ENSPFOP00000014127	ENSPFOP00000001150	Translocated promoter region b, nuclear basket protein.	KN motif and ankyrin repeat domains 1.	0.548
LOC103137288	tpr	ENSPFOP00000014127	ENSPFOP00000006667	Translocated promoter region b, nuclear basket protein.	Translocated promoter region a, nuclear basket protein.	0.905
kank1	ENSPFOP00000011219	ENSPFOP00000001150	ENSPFOP00000011219	KN motif and ankyrin repeat domains 1.	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.783
kank1	ENSPFOP00000013018	ENSPFOP00000001150	ENSPFOP00000013018	KN motif and ankyrin repeat domains 1.	EMI domain-containing protein.	0.531
kank1	ENSPFOP00000019318	ENSPFOP00000001150	ENSPFOP00000019318	KN motif and ankyrin repeat domains 1.	Uncharacterized protein.	0.543
kank1	KIF21A	ENSPFOP00000001150	ENSPFOP00000007431	KN motif and ankyrin repeat domains 1.	Kinesin family member 21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.783
kank1	LOC103134861	ENSPFOP00000001150	ENSPFOP00000001288	KN motif and ankyrin repeat domains 1.	Doublesex and mab-3 related transcription factor 1.	0.581