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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001153Uncharacterized protein. (257 aa)    
Predicted Functional Partners:
ENSPFOP00000009388
UBX domain protein 7.
    
   0.752
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.614
mrpl33
Mitochondrial ribosomal protein L33.
   
   0.611
mrpl43
Mitochondrial ribosomal protein L43.
   
   0.609
ENSPFOP00000016349
Mitochondrial ribosomal protein S6.
   
   0.598
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.596
LOC103144433
Mitochondrial ribosomal protein L23.
   
 
 0.593
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.590
ENSPFOP00000019669
Mitochondrial ribosomal protein S10.
   
 
 0.581
ENSPFOP00000012519
Mitochondrial ribosomal protein L40.
   
 
 0.580
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.