Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000001158Uncharacterized protein; Belongs to the cytochrome P450 family. (509 aa)    
Predicted Functional Partners:
ENSPFOP00000028053
AMP-binding domain-containing protein.
  
 0.694
nbn
Nibrin.
    
 0.607
ENSPFOP00000005078
BRCA1 associated RING domain 1.
    
 0.585
LOC103154387
Zgc:92275.
  
 
 0.567
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.564
flad1
Flavin adenine dinucleotide synthetase 1.
   
 0.538
exo1
Exonuclease 1.
    
 0.526
slf1
SMC5-SMC6 complex localization factor 1.
    
 0.523
ENSPFOP00000009158
Carrier domain-containing protein.
  
 0.522
LOC103140579
Si:dkey-61p9.11.
  
 0.522
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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