Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbxw4F-box and WD repeat domain containing 4. (424 aa)    
Predicted Functional Partners:
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.989
txndc9
Thioredoxin domain containing 9.
    
   0.974
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
  0.967
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.962
cct3
T-complex protein 1 subunit gamma.
    
  0.961
cct4
T-complex protein 1 subunit delta.
    
 0.959
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
  0.951
ENSPFOP00000018348
Chaperonin containing TCP1, subunit 8 (theta).
    
  0.912
PDCL3
Phosducin like 3.
    
   0.903
tcp1
T-complex 1.
    
  0.900
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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