Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPFOP00000001170Leucine rich repeat containing 6. (435 aa)    
Predicted Functional Partners:
zmynd10
Zinc finger, MYND-type containing 10.
     
 0.908
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.866
ENSPFOP00000013001
Dynein, axonemal, light intermediate chain 1.
   
 
 0.861
dnaaf4
Dynein axonemal assembly factor 4.
    
 
 0.846
ENSPFOP00000008660
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 
 
 0.843
ENSPFOP00000002482
NYD-SP28 domain-containing protein.
   
 
 0.830
ENSPFOP00000016873
IQ motif and ubiquitin domain containing.
   
 0.811
ENSPFOP00000027409
Dynein, axonemal, assembly factor 3 like.
      
 0.798
ENSPFOP00000010072
Dynein, axonemal, intermediate chain 2b.
    
 
 0.795
ENSPFOP00000023483
Uncharacterized protein.
    
 
 0.794
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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