Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001172Myosin_tail_1 domain-containing protein. (690 aa)    
Predicted Functional Partners:
LOC103132199
Myosin_tail_1 domain-containing protein.
  
 
 
0.914
ENSPFOP00000004489
Rho/rac guanine nucleotide exchange factor (GEF) 18a.
   
  0.913
LOC103139421
Tight junction protein 1a; Belongs to the MAGUK family.
    
  0.912
ENSPFOP00000005566
Tight junction protein 1b; Belongs to the MAGUK family.
    
  0.912
gata4
GATA binding protein 4.
    
 0.902
cgn
Cingulin a.
  
  
 
0.901
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
     
  0.900
ENSPFOP00000012361
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
     
  0.900
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.585
ENSPFOP00000015912
WD repeat domain 90.
    
 0.546
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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