Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103141963Leucine rich repeat containing 8 VRAC subunit Ab. (795 aa)    
Predicted Functional Partners:
ENSPFOP00000010147
Si:ch211-106h11.1.
   
  0.639
LOC103139859
Leucine rich repeat containing 8 VRAC subunit Db.
   
  0.639
lrrc8d
Leucine rich repeat containing 8 VRAC subunit Da.
   
  0.639
lrrc8c
Leucine rich repeat containing 8 VRAC subunit C.
     
  0.567
ENSPFOP00000008538
Decorin; May affect the rate of fibrils formation.
  
     0.509
ENSPFOP00000007196
Corin, serine peptidase.
    
 0.503
ENSPFOP00000005041
Chloride channel 6; Belongs to the chloride channel (TC 2.A.49) family.
      
 0.500
ENSPFOP00000015912
WD repeat domain 90.
    
  0.476
LOC103155740
Asporin.
  
     0.451
ENSPFOP00000013340
Uncharacterized protein.
    
 
 0.450
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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