STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phf13PHD finger protein 13. (326 aa)    
Predicted Functional Partners:
mcrs1
Microspherule protein 1.
    
 0.888
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.862
ENSPFOP00000000730
Testis expressed 30.
    
 0.848
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.848
ENSPFOP00000012887
T-box transcription factor 20.
    
   0.750
ENSPFOP00000001631
SET domain containing 2, histone lysine methyltransferase.
   
 0.741
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 0.721
rbbp5
Retinoblastoma binding protein 5.
    
 0.673
LOC103144472
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 0.666
ENSPFOP00000017485
SET binding protein 1.
   
 0.666
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.