LOC103131250 protein (Poecilia formosa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

LOC103131250

Si:ch211-197l9.5. (411 aa)

Predicted Functional Partners:

ENSPFOP00000007796

0.787

ENSPFOP00000016945

0.734

ZBTB21

0.730

chaf1b

0.699

cetn2

0.661

ENSPFOP00000017245

0.661

ENSPFOP00000017250

0.661

LOC103137297

0.661

ENSPFOP00000027856

0.661

ENSPFOP00000015912

0.629

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000007796	LOC103131250	ENSPFOP00000007796	ENSPFOP00000001192	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	Si:ch211-197l9.5.	0.787
ENSPFOP00000015912	ENSPFOP00000017245	ENSPFOP00000015912	ENSPFOP00000017245	WD repeat domain 90.	Uncharacterized protein.	0.838
ENSPFOP00000015912	ENSPFOP00000017250	ENSPFOP00000015912	ENSPFOP00000017250	WD repeat domain 90.	annotation not available	0.838
ENSPFOP00000015912	ENSPFOP00000027856	ENSPFOP00000015912	ENSPFOP00000027856	WD repeat domain 90.	CDP-L-ribitol pyrophosphorylase A.	0.838
ENSPFOP00000015912	LOC103131250	ENSPFOP00000015912	ENSPFOP00000001192	WD repeat domain 90.	Si:ch211-197l9.5.	0.629
ENSPFOP00000015912	LOC103137297	ENSPFOP00000015912	ENSPFOP00000018426	WD repeat domain 90.	Centrin 4.	0.838
ENSPFOP00000015912	cetn2	ENSPFOP00000015912	ENSPFOP00000012767	WD repeat domain 90.	Centrin, EF-hand protein, 2.	0.838
ENSPFOP00000016945	LOC103131250	ENSPFOP00000016945	ENSPFOP00000001192	Regulatory associated protein of MTOR, complex 1.	Si:ch211-197l9.5.	0.734
ENSPFOP00000017245	ENSPFOP00000015912	ENSPFOP00000017245	ENSPFOP00000015912	Uncharacterized protein.	WD repeat domain 90.	0.838
ENSPFOP00000017245	LOC103131250	ENSPFOP00000017245	ENSPFOP00000001192	Uncharacterized protein.	Si:ch211-197l9.5.	0.661
ENSPFOP00000017245	LOC103137297	ENSPFOP00000017245	ENSPFOP00000018426	Uncharacterized protein.	Centrin 4.	0.824
ENSPFOP00000017245	cetn2	ENSPFOP00000017245	ENSPFOP00000012767	Uncharacterized protein.	Centrin, EF-hand protein, 2.	0.823
ENSPFOP00000017250	ENSPFOP00000015912	ENSPFOP00000017250	ENSPFOP00000015912	annotation not available	WD repeat domain 90.	0.838
ENSPFOP00000017250	LOC103131250	ENSPFOP00000017250	ENSPFOP00000001192	annotation not available	Si:ch211-197l9.5.	0.661
ENSPFOP00000017250	LOC103137297	ENSPFOP00000017250	ENSPFOP00000018426	annotation not available	Centrin 4.	0.624
ENSPFOP00000017250	cetn2	ENSPFOP00000017250	ENSPFOP00000012767	annotation not available	Centrin, EF-hand protein, 2.	0.624
ENSPFOP00000027856	ENSPFOP00000015912	ENSPFOP00000027856	ENSPFOP00000015912	CDP-L-ribitol pyrophosphorylase A.	WD repeat domain 90.	0.838
ENSPFOP00000027856	LOC103131250	ENSPFOP00000027856	ENSPFOP00000001192	CDP-L-ribitol pyrophosphorylase A.	Si:ch211-197l9.5.	0.661
LOC103131250	ENSPFOP00000007796	ENSPFOP00000001192	ENSPFOP00000007796	Si:ch211-197l9.5.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.787
LOC103131250	ENSPFOP00000015912	ENSPFOP00000001192	ENSPFOP00000015912	Si:ch211-197l9.5.	WD repeat domain 90.	0.629