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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000001207Glutamate receptor, ionotropic, AMPA 1a. (726 aa)    
Predicted Functional Partners:
ENSPFOP00000019089
Cornichon family AMPA receptor auxiliary protein 2.
    
 0.837
LOC103146616
Uncharacterized protein.
  
0.830
GRIA2
Glutamate receptor, ionotropic, AMPA 2b.
  
0.829
LOC103144737
Cornichon family AMPA receptor auxiliary protein 1.
    
 0.817
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
    
 0.814
pick1
Protein interacting with prkca 1.
    
 0.804
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.780
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.780
ENSPFOP00000012744
Glutamate receptor interacting protein 1.
   
 0.751
ENSPFOP00000008934
Glutamate receptor interacting protein 2b.
    
 0.748
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.